Domain List - domains found in retrovirus

 

Domain# of viruses# of mammal proteins# of plant proteins# of DDI GO
pfam00077/RVP4612 3 
pfam00906/Hepatitis_core8  2
pfam03708/Avian_gp853   
pfam02959/Tax7  1
pfam07716/bZIP_245353644
pfam00695/vMSA8   
pfam03408/Foamy_virus_ENV6   
pfam02160/Peptidase_A320    
pfam07028/DUF131919    
pfam02228/Gag_p197   
pfam06712/DUF11991    
pfam05858/BIV_Env1   
pfam04758/Ribosomal_S3013828 
pfam00971/EIAV_GP901   
pfam00069/Pkinase1368074804335
pfam02337/Gag_p107   
pfam05599/Deltaretro_Tax1    
pfam00517/GP4115  2
pfam00516/GP1205  5
pfam12072/DUF355212    
pfam06216/RTBV_P461    
pfam00559/Vif5   
pfam00558/Vpu2   
pfam00607/Gag_p2429  7
pfam00075/RnaseH6615474
pfam00098/zf-CCHC391231852
pfam02022/Integrase_Zn23  4
pfam00078/RVT_1102 978
pfam00552/Integrase27  2
pfam08919/F_actin_bind151  
pfam08723/Gag_p151  1 
pfam00665/rve6922334
pfam00336/DNA_pol_viral_C8   
pfam00017/SH261660 12
pfam01141/Gag_p128   
pfam01140/Gag_MA14  1
pfam00739/X3   
pfam00010/HLH214689082
pfam04160/Borrelia_orfX1    
pfam00170/bZIP_156033805
pfam00539/Tat5  4
pfam06839/zf-GRF25288 
pfam06815/RVT_connect10  4
pfam00018/SH3_1327224718 
pfam06817/RVT_thumb19  3
pfam08290/Hep_core_N2   
pfam03276/Gag_spuma3   
pfam07653/SH3_232634406 
pfam03274/Foamy_BEL3   
pfam00692/dUTPase18730171
pfam02093/Gag_p3011  1
pfam03539/Spuma_A9PTase6   
pfam09590/Env-gp361    
pfam11976/Rad60-SLD565743335 
pfam03233/Cauli_AT7   
pfam04692/PDGF_N126 1
pfam00341/PDGF4139 5
pfam07714/Pkinase_Tyr98748175449
pfam01054/MMTV_SAg1    
pfam00429/TLV_coat17  1 
pfam01056/Myc_N2  2
pfam05851/Lentivirus_VIF1   
pfam00424/REV3  2
pfam01585/G-patch6281127 
pfam00240/ubiquitin5695053734 
pfam00522/VPR5  1
pfam00469/F-protein5  3
pfam01693/Cauli_VI1115   
pfam02998/Lentiviral_Tat3   
pfam11008/DUF28461    
pfam07401/Lenti_VIF_21    
pfam00611/FCH1371 2 
pfam03310/Cauli_DNA-bind6  1
pfam06361/RTBV_P121    
pfam00242/DNA_pol_viral_N8   
pfam09337/zf-H2C21    
pfam02813/Retro_M5    
pfam00540/Gag_p175  4
pfam01107/MP58   
pfam08705/Gag_p61  1 


 
abbr.
* DDI: Domain-Domain Interaction
* GO: Gene Ontology